species:   Scscl
pid:       PID1639
parent:    Ssc-milR-115
paralog:   
locus:     NW_001820824.1:18523-18597
matures:   ['UGAUGCAAGAUCCUAGGAGGU', 'CUCCUUAUAUGCAUCAUG']
srr:       SRR12527896
genome:    /Users/jax/+Genomes/Fungal_genomes/Scscl.GCF_000146945.2_ASM14694v2.fa
alignment: /media/data/njohnson/+SeqLibraries/FunHP_libraries/Xia2020-rh.SRR12527896.cram
call:      samtools view /media/data/njohnson/+SeqLibraries/FunHP_libraries/Xia2020-rh.SRR12527896.cram NW_001820824.1:18523-18597

0 out of bounds
1 alignments
1 proper strand
1 stranded perfect matches

         ********************             ***********************          
AGUUUUGUUUGCUCCUUAUAUGCAUCAUGCAAUAUAUAUGCAUAUGAUGCAAGAUCCUAGGAGGUCAACAAUAAC
.((((((((..(((((.((.(((((((((((.......))))..)))))))..))...)))))...))))).)))
--------------------------------------------UGAUGCAAGAUCCUAGGAGGU---------- l=21 a=1 c
-----------CUCCUUAUAUGCAUCAUG---------------------------------------------- l=18 a=0 c*
--------------------------------------------UGAUGCAAGAUCCUAGGAGGU---------- l=21 a=1 ma
-----------CUCCUUAUAUGCAUCAUG---------------------------------------------- l=18 a=0 ma*

--------------------------------------------UGAUGCAAGAUCCUAGGAGGU---------- l=21 a=1 (c,ma)

mb-01011
ax-1011111
ku-01
ss-110111101010
fn-111
